SegGal: a gallery of pre-trained cell segmentation models

Image Type

Segmentation Type

Image Channel

Training Data

Order By

Method

Usage Guide:

Pre-trained Model:

Fluorescence Staining

Light Microscopy

Cell Nuclei Segmentation

Whole Cell Segmentation

Dual Channel Image

Single Channel Image

All

Lymph Node Metastasis

Pancreas

Esophagus

Tonsil

Breast

Colon

Epidermis

Lymph Node

Lung

Spleen

Overall

Accuracy

Usability

Scalability

Cellpose

Swin-T

Swin-S

Segment Anything

RF-Next

SOLOv2

HRNet

Cascade Mask RCNN seesaw

Res2Net

StarDist

Centermask2

Mesmer

ResNeSt

Mask RCNN

FeatureNet

MS RCNN

Mask2former

RetinaMask

https://github.com/BoomStarcuc/Cell-Segmentation-Benchmark/tree/master/Cellpose_BM

https://drive.google.com/drive/folders/1hrD134nuaNhgB33ovcSZUisWRvOJ-Bhf?usp=sharing

Accuracy:

Usability:

Scalability:

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